Leading science, pioneering therapies
CRM Publications

GeneProf data: a resource of curated, integrated and reusable high-throughput genomics experiments.

TitleGeneProf data: a resource of curated, integrated and reusable high-throughput genomics experiments.
Publication TypeJournal Article
Year of Publication2014
AuthorsHalbritter F, Kousa AI, Tomlinson SR
JournalNucleic Acids Res
Volume42
IssueDatabase issue
PaginationD851-8
Date Published2014 Jan
ISSN1362-4962
KeywordsAnimals, Binding Sites, Databases, Genetic, Gene Expression Profiling, Genomics, High-Throughput Nucleotide Sequencing, Humans, Internet, Mice, Sequence Analysis, RNA, Systems Integration, Transcription Factors
Abstract

GeneProf Data (http://www.geneprof.org) is an open web resource for analysed functional genomics experiments. We have built up a large collection of completely processed RNA-seq and ChIP-seq studies by carefully and transparently reanalysing and annotating high-profile public data sets. GeneProf makes these data instantly accessible in an easily interpretable, searchable and reusable manner and thus opens up the path to the advantages and insights gained from genome-scale experiments to a broader scientific audience. Moreover, GeneProf supports programmatic access to these data via web services to further facilitate the reuse of experimental data across tools and laboratories.

DOI10.1093/nar/gkt966
Alternate JournalNucleic Acids Res.
PubMed ID24174536
PubMed Central IDPMC3965072
Grant ListG0901533 / / Medical Research Council / United Kingdom