CRM Publications

Seeker LA, Ilska JJ, Psifidi A, Wilbourn RV, Underwood SL, Fairlie J, Holland R, Froy H, Bagnall A, Whitelaw B et al..  2018.  Longitudinal changes in telomere length and associated genetic parameters in dairy cattle analysed using random regression models.PLoS One. 13(2):e0192864.

Seeker LA, Holland R, Underwood S, Fairlie J, Psifidi A, Ilska JJ, Bagnall A, Whitelaw B, Coffey M, Banos G et al..  2016.  Method Specific Calibration Corrects for DNA Extraction Method Effects on Relative Telomere Length Measurements by Quantitative PCR.PLoS One. 11(10):e0164046.

Illingworth R, Gruenewald-Schneider U, De Sousa D, Webb S, Merusi C, Kerr ARW, James KD, Smith C, Walker R, Andrews R et al..  2015.  Inter-individual variability contrasts with regional homogeneity in the human brain DNA methylome.Nucleic Acids Res. 43(2):732-44.

Soufi A, Garcia MFernandez, Jaroszewicz A, Osman N, Pellegrini M, Zaret KS.  2015.  Pioneer transcription factors target partial DNA motifs on nucleosomes to initiate reprogramming.Cell. 161(3):555-68.

Barakat TStefan, Gribnau J.  2014.  Combined DNA-RNA fluorescent in situ hybridization (FISH) to study X chromosome inactivation in differentiated female mouse embryonic stem cells.J Vis Exp. (88)

Roberts GA, Dryden DTF.  2013.  DNA electrophoresis: historical and theoretical perspectives.Methods Mol Biol. 1054:1-9.

Roberts GA, Stephanou AS, Kanwar N, Dawson A, Cooper LP, Chen K, Nutley M, Cooper A, Blakely GW, Dryden DTF.  2012.  Exploring the DNA mimicry of the Ocr protein of phage T7.Nucleic Acids Res. 40(16):8129-43.

Calaminus SDJ, Guitart A, Guitart A, Sinclair A, Schachtner H, Watson SP, Holyoake TL, Kranc KR, Machesky LM.  2012.  Lineage tracing of Pf4-Cre marks hematopoietic stem cells and their progeny.PLoS One. 7(12):e51361.

Hammachi F, Morrison GM, Sharov AA, Livigni A, Narayan S, Papapetrou EP, O'Malley J, Kaji K, Ko MSH, Ptashne M et al..  2012.  Transcriptional activation by Oct4 is sufficient for the maintenance and induction of pluripotency.Cell Rep. 1(2):99-109.

Severi F, Chicca A, Conticello SG.  2011.  Analysis of reptilian APOBEC1 suggests that RNA editing may not be its ancestral function.Mol Biol Evol. 28(3):1125-9.

Roberts GA, Cooper LP, White JH, Su T-J, Zipprich JT, Geary P, Kennedy C, Dryden DTF.  2011.  An investigation of the structural requirements for ATP hydrolysis and DNA cleavage by the EcoKI Type I DNA restriction and modification enzyme.Nucleic Acids Res. 39(17):7667-76.

Soufi A, Sawasdichai A, Shukla A, Noy P, Dafforn T, Smith C, Jayaraman P-S, Gaston K.  2010.  DNA compaction by the higher-order assembly of PRH/Hex homeodomain protein oligomers.Nucleic Acids Res. 38(21):7513-25.

Chen K, Roberts GA, Stephanou AS, Cooper LP, White JH, Dryden DTF.  2010.  Fusion of GFP to the M.EcoKI DNA methyltransferase produces a new probe of Type I DNA restriction and modification enzymes.Biochem Biophys Res Commun. 398(2):254-9.

Wang S, Kou Z, Jing Z, Zhang Y, Guo X, Dong M, Wilmut I, Gao S.  2010.  Proteome of mouse oocytes at different developmental stages.Proc Natl Acad Sci U S A. 107(41):17639-44.

Soufi A, Noy P, Buckle M, Sawasdichai A, Gaston K, Jayaraman P-S.  2009.  CK2 phosphorylation of the PRH/Hex homeodomain functions as a reversible switch for DNA binding.Nucleic Acids Res. 37(10):3288-300.

Stephanou AS, Roberts GA, Cooper LP, Clarke DJ, Thomson AR, C MacKay L, Nutley M, Cooper A, Dryden DTF.  2009.  Dissection of the DNA mimicry of the bacteriophage T7 Ocr protein using chemical modification.J Mol Biol. 391(3):565-76.

McMahon SA, Roberts GA, Johnson KA, Cooper LP, Liu H, White JH, Carter LG, Sanghvi B, Oke M, Walkinshaw MD et al..  2009.  Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistance.Nucleic Acids Res. 37(15):4887-97.

Chambers I, Tomlinson SR.  2009.  The transcriptional foundation of pluripotency.Development. 136(14):2311-22.

Quinn J, Kunath T, Rossant J.  2006.  Mouse trophoblast stem cells.Methods Mol Med. 121:125-48.

Soufi A, Smith C, Clarke AR, Gaston K, Jayaraman P-S.  2006.  Oligomerisation of the developmental regulator proline rich homeodomain (PRH/Hex) is mediated by a novel proline-rich dimerisation domain.J Mol Biol. 358(4):943-62.

Soufi A, Gaston K, Jayaraman P-S.  2006.  Purification and characterisation of the PRH homeodomain: Removal of the N-terminal domain of PRH increases the PRH homeodomain-DNA interaction.Int J Biol Macromol. 39(1-3):45-50.

Lieu H-T, Simon M-T, Nguyen-Khoa T, Kebede M, Cortes A, Tebar L, Smith AG, Bayne R, Hunt SP, Bréchot C et al..  2006.  Reg2 inactivation increases sensitivity to Fas hepatotoxicity and delays liver regeneration post-hepatectomy in mice.Hepatology. 44(6):1452-64.

Carvalho LR, Woods KS, Mendonca BB, Marcal N, Zamparini AL, Stifani S, Brickman JM, Arnhold IJP, Dattani MT.  2003.  A homozygous mutation in HESX1 is associated with evolving hypopituitarism due to impaired repressor-corepressor interaction.J Clin Invest. 112(8):1192-201.

Hendrich B, Tweedie S.  2003.  The methyl-CpG binding domain and the evolving role of DNA methylation in animals.Trends Genet. 19(5):269-77.

Hendrich B, Bickmore WA.  2001.  Human diseases with underlying defects in chromatin structure and modification.Hum Mol Genet. 10(20):2233-42.